Results of BLAST-searches against: genembl
| contig | match pos. in query |
orient. | match pos. in target |
data base entry | ||
| 00903 | 39445 | 39502 | +1 | 89 | 146 | G44055 WIAF-3685-STS Human THudson SANGER Homo sapiens STS genomic, sequence tagged site. 1/1999 Length = 146 |
| .......... | ||||||
| 00903 | 67348 | 67399 | +1 | 1 | 52 | G36355 CD18-667 Domestic pigs Sus scrofa STS genomic, sequence tagged site. 10/1997 Length = 742 |
| 00903 | 67400 | 67497 | +1 | 54 | 151 | |
| 00903 | 68499 | 68539 | +1 | 691 | 731 | |
| .......... | ||||||
| 00903 | 39104 | 38970 | -1 | 223 | 357 | G27479 human STS SHGC-32286, sequence tagged site. 6/1996 Length = 367 |
| 00903 | 39267 | 39102 | -1 | 58 | 223 | |
| .......... | ||||||
| 00903 | 58610 | 58695 | +1 | 65 | 150 | M31039 Mus musculus complement receptor 3 beta subunit MAC-1/ mRNA, complete cds. 4/1993 Length = 2459 |
| 00903 | 65441 | 65615 | +1 | 329 | 503 | |
| 00903 | 67245 | 67490 | +1 | 502 | 747 | |
| 00903 | 68493 | 68660 | +1 | 734 | 901 | |
| 00903 | 69817 | 69912 | +1 | 901 | 996 | |
| .......... | ||||||
| 00903 | 58610 | 58695 | +1 | 143 | 228 | X14951 M.musculus mRNA for CD18 antigen beta subunit, leukocyte adhesion protein (LFA-1). 10/1996 Length = 2828 |
| 00903 | 65441 | 65615 | +1 | 407 | 581 | |
| 00903 | 67245 | 67490 | +1 | 580 | 825 | |
| 00903 | 68493 | 68660 | +1 | 812 | 979 | |
| 00903 | 69817 | 69912 | +1 | 979 | 1074 | |
| .......... | ||||||
| 00903 | 69817 | 69912 | +1 | 877 | 972 | AF051367 Mus musculus pactolus mRNA, complete cds. 7/1998 Length = 2628 |
| .......... | ||||||
| 00903 | 58508 | 58553 | +1 | 1 | 46 | S67878 CD18=leukocyte integrin LFA-1 common beta 2 subunit {insertion in intron 2} [human, patient HS, Genomic Mutant, 105 nt]. 3/1994 Length = 105 |
| 00903 | 58546 | 58613 | +1 | 38 | 105 | |
| .......... | ||||||
| 00903 | 19541 | 19494 | -1 | 82059 | 82106 | AC007436 Homo sapiens 12p13 BAC RPCI11-436I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence. 6/1999 Length = 163,881 |
| 00903 | 43708 | 43662 | -1 | 128214 | 128260 | |
| .......... | ||||||
| 00903 | 43707 | 43662 | -1 | 9035 | 9080 | AC006270 Homo sapiens chromosome 17, clone hRPK.556_O_9, complete sequence. 1/1999 Length = 179,929 |
| .......... | ||||||
| 00903 | 43708 | 43662 | -1 | 13070 | 13116 | AC005831 Homo sapiens 12p13.3 PAC RPCI5-1180D12 (Roswell Park Cancer Institute Human PAC Library) complete sequence. 2/1999 Length = 144,515 |
| .......... | ||||||
| 00903 | 43662 | 43705 | +1 | 134096 | 134139 | AC005562 Homo sapiens chromosome 17, clone hRPK.271_K_11, complete sequence. 1/1999 Length = 199,182 |
| .......... | ||||||
| 00903 | 43339 | 43301 | -1 | 52303 | 52341 | AC003003 Human Chromosome 16 BAC clone CIT987SK-254P9, complete sequence. 3/1998 Length = 130,381 |
| .......... | ||||||
| 00903 | 43708 | 43662 | -1 | 142877 | 142923 | AC005585 Homo sapiens chromosome 22, clone hRPC.130_H_16, complete sequence. 9/1998 Length = 158,257 |
| .......... | ||||||
| 00903 | 43663 | 43708 | +1 | 9746 | 9791 | AC004707 Homo sapiens chromosome 17, clone hRPC.117_B_12, complete sequence. 6/1998 Length = 123,585 |
| .......... | ||||||
| 00903 | 27828 | 27890 | +1 | 61303 | 61365 | AC003014 Human PAC clone DJ290B04 from Xq23, complete sequence. 10/1997 Length = 76,169 |
| .......... | ||||||
| 00903 | 68472 | 68509 | +1 | 1 | 38 | S81252 beta 2 integrin subunit {exon vi/exon vii} [human, Genomic Mutant, 38 nt, segment 2 of 2]. 5/1993 Length = 38 |
| .......... | ||||||
| 00903 | 69789 | 69877 | +1 | 1 | 89 | S36347 adhesion molecule beta subunit {cyptic splice donor sites} [human, Genomic Mutant, 89 nt, segment 2 of 2]. 5/1993 Length = 89 |
| .......... | ||||||
| 00903 | 68624 | 68971 | +1 | 1 | 348 | S36324 adhesion molecule beta subunit {cyptic splice donor sites} [human, Genomic Mutant, 348 nt, segment 1 of 2]. 5/1993 Length = 348 |
| .......... | ||||||
| 00903 | 48090 | 48159 | +1 | 1 | 70 | M15395 Human leukocyte adhesion protein (LFA-1/Mac-1/p150,95 family) beta subunit mRNA. 1/1995 Length = 2776 |
| 00903 | 58176 | 58254 | +1 | 52 | 130 | |
| 00903 | 58606 | 58695 | +1 | 130 | 219 | |
| 00903 | 61881 | 62065 | +1 | 217 | 401 | |
| 00903 | 65428 | 65615 | +1 | 385 | 572 | |
| 00903 | 67245 | 67490 | +1 | 571 | 816 | |
| 00903 | 68501 | 68660 | +1 | 811 | 970 | |
| 00903 | 69817 | 69912 | +1 | 970 | 1065 | |
| .......... | ||||||
| 00903 | 47264 | 47354 | +1 | 99 | 189 | M95293 Homo sapiens integrin beta subunit (CD18) gene, exon 1. 12/1994 Length = 1324 |
| 00903 | 47480 | 47522 | +1 | 298 | 340 | |
| 00903 | 47517 | 47617 | +1 | 334 | 434 | |
| 00903 | 47619 | 47719 | +1 | 435 | 535 | |
| 00903 | 47693 | 48007 | +1 | 508 | 822 | |
| 00903 | 48010 | 48267 | +1 | 823 | 1080 | |
| 00903 | 48256 | 48333 | +1 | 1068 | 1145 | |
| 00903 | 48322 | 48428 | +1 | 1133 | 1239 | |
| 00903 | 48425 | 48452 | +1 | 1235 | 1262 | |
| 00903 | 48461 | 48517 | +1 | 1268 | 1324 | |
| .......... | ||||||
| 00903 | 70464 | 70302 | -1 | 333141 | 333303 | AJ011930 Homo sapiens chromosome 21q22.3, PAC clones 314N7, 225L15, BAC clone 7B7, complete sequence bases 1..333303. 11/1998 Length = 333,303 |
| 00903 | 71318 | 70979 | -1 | 332287 | 332626 | |
| 00903 | 72671 | 71398 | -1 | 330934 | 332207 | |
| 00903 | 72988 | 72845 | -1 | 330638 | 330781 | |
| 00903 | 72988 | 72863 | -1 | 330659 | 330784 | |
| 00903 | 73018 | 72845 | -1 | 330587 | 330760 | |
| .......... | ||||||
| 00903 | 45557 | 45604 | +1 | 35172 | 35219 | AL049829 Human chromosome 14 DNA sequence *** IN PROGRESS *** BAC 124D2 of RPCI-11 library from chromosome 14 of Homo sapiens (Human), complete sequence. 6/1999 Length = 196,267 |
| .......... | ||||||
| 00903 | 47264 | 47354 | +1 | 102 | 192 | M77675 Human CD18 integrin beta subunit promoter. 11/1993 Length = 1355 |
| 00903 | 47406 | 47507 | +1 | 244 | 345 | |
| 00903 | 47508 | 48267 | +1 | 345 | 1104 | |
| 00903 | 48256 | 48480 | +1 | 1092 | 1316 | |
| 00903 | 48425 | 48520 | +1 | 1260 | 1355 | |
| .......... | ||||||
| 00903 | 58221 | 58254 | +1 | 1 | 34 | Y00057 Human mRNA for beta-subunit of cell surface adhesion glycoproteins LFA-1, CR3 and p150,95. 7/1995 Length = 2291 |
| 00903 | 58606 | 58695 | +1 | 34 | 123 | |
| 00903 | 61881 | 62065 | +1 | 121 | 305 | |
| 00903 | 65428 | 65615 | +1 | 289 | 476 | |
| 00903 | 67245 | 67490 | +1 | 475 | 720 | |
| 00903 | 68501 | 68660 | +1 | 715 | 874 | |
| 00903 | 69817 | 69912 | +1 | 874 | 969 | |
| .......... | ||||||
| 00903 | 69807 | 69922 | +1 | 1 | 116 | X64078 H. sapiens CD18 exon 8. 12/1997 Length = 116 |
| .......... | ||||||
| 00903 | 68494 | 68669 | +1 | 1 | 176 | X64077 H. sapiens CD18 exon 7. 12/1997 Length = 176 |
| .......... | ||||||
| 00903 | 67236 | 67497 | +1 | 1 | 262 | X64076 H. sapiens CD18 exon 6. 12/1997 Length = 262 |
| .......... | ||||||
| 00903 | 65434 | 65624 | +1 | 1 | 191 | X64075 H. sapiens CD18 exon 5. 12/1997 Length = 191 |
| .......... | ||||||
| 00903 | 61874 | 62074 | +1 | 1 | 201 | X64074 H. sapiens CD18 exon 4. 12/1997 Length = 201 |
| .......... | ||||||
| 00903 | 58597 | 58705 | +1 | 1 | 109 | X64073 H. sapiens CD18 exon 3. 12/1997 Length = 109 |
| .......... | ||||||
| 00903 | 58184 | 58264 | +1 | 1 | 81 | X64072 H. sapiens CD18 exon 2. 12/1997 Length = 81 |
| .......... | ||||||
| 00903 | 47987 | 48168 | +1 | 1 | 182 | X64071 H. sapiens CD18 exon 1. 7/1997 Length = 182 |
| .......... | ||||||
| 00903 | 48090 | 48159 | +1 | 1 | 70 | I08860 Sequence 6 from Patent WO 8806592. 12/1994 Length = 2776 |
| 00903 | 58176 | 58254 | +1 | 52 | 130 | |
| 00903 | 58606 | 58695 | +1 | 130 | 219 | |
| 00903 | 61881 | 62065 | +1 | 217 | 401 | |
| 00903 | 65428 | 65615 | +1 | 385 | 572 | |
| 00903 | 67245 | 67490 | +1 | 571 | 816 | |
| 00903 | 68501 | 68660 | +1 | 811 | 970 | |
| 00903 | 69817 | 69912 | +1 | 970 | 1065 | |
| .......... | ||||||
| 00903 | 69817 | 69902 | +1 | 1003 | 1088 | X71786 G.gallus mRNA for integrin beta 2 subunit. 12/1994 Length = 3354 |
| .......... | ||||||
| 00903 | 58191 | 58254 | +1 | 131 | 194 | U13941 Sus scrofa CD18 mRNA, complete cds. 10/1996 Length = 2929 |
| 00903 | 58603 | 58695 | +1 | 191 | 283 | |
| 00903 | 65441 | 65615 | +1 | 462 | 636 | |
| 00903 | 67245 | 67490 | +1 | 635 | 880 | |
| 00903 | 68501 | 68660 | +1 | 875 | 1034 | |
| 00903 | 69817 | 69912 | +1 | 1034 | 1129 | |
| .......... | ||||||
| 00903 | 65621 | 65455 | -1 | 177 | 343 | U73480 Bos taurus CD18 subunit gene, intron 5 and exons 5 and 6. 11/1996 Length = 344 |
| .......... | ||||||
| 00903 | 65437 | 65621 | +1 | 1139 | 1323 | Y12672 B.taurus CD18 gene. 11/1998 Length = 1640 |
| 00903 | 67236 | 67410 | +1 | 1466 | 1640 | |
| .......... | ||||||
| 00903 | 58603 | 58695 | +1 | 160 | 252 | M81233 Bos taurus antigen CD18 (CD18) mRNA, complete cds. 4/1993 Length = 2817 |
| 00903 | 65441 | 65616 | +1 | 431 | 606 | |
| 00903 | 67245 | 67490 | +1 | 604 | 849 | |
| 00903 | 68501 | 68660 | +1 | 844 | 1003 | |
| 00903 | 69817 | 69912 | +1 | 1003 | 1098 | |
| .......... | ||||||
| 00903 | 43301 | 43342 | +1 | 6991 | 7032 | AC009242 Homo sapiens clone NH0557N21, WORKING DRAFT SEQUENCE, 12 unordered pieces. 8/1999 Length = 209,461 |
| .......... | ||||||
| 00903 | 1798 | 1945 | +1 | 60326 | 60473 | AL109748 Homo sapiens chromosome 21 clone RPCIP704M13256Q2 map 21q11.1, WORKING DRAFT SEQUENCE, in unordered pieces. 8/1999 Length = 76,185 |
| 00903 | 8811 | 8850 | +1 | 60474 | 60513 | |
| 00903 | 8844 | 8881 | +1 | 60504 | 60541 | |
| 00903 | 25184 | 25288 | +1 | 60537 | 60641 | |
| .......... | ||||||
| 00903 | 1945 | 1798 | -1 | 138416 | 138563 | AL050303 Homo sapiens chromosome 21 clone RPCIP704G14214Q2 map 21q11.1, WORKING DRAFT SEQUENCE, in unordered pieces. 6/1999 Length = 188,584 |
| 00903 | 8850 | 8811 | -1 | 138376 | 138415 | |
| 00903 | 8881 | 8844 | -1 | 138348 | 138385 | |
| 00903 | 25288 | 25184 | -1 | 138248 | 138352 | |
| .......... | ||||||
| 00903 | 43663 | 43701 | +1 | 113966 | 114004 | AC006967 Homo sapiens clone DJ0639J15, WORKING DRAFT SEQUENCE, 13 unordered pieces. 3/1999 Length = 141,741 |